STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBSjogren syndrome antigen B. (409 aa)    
Predicted Functional Partners:
RO60
60 kDa SS-A/Ro ribonucleoprotein.
    
 
 0.759
ZC3H15
Zinc finger CCCH-type containing 15.
   
    0.751
CCT8
Chaperonin containing TCP1 subunit 8.
   
  
 0.701
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 
 0.701
METAP2
Methionyl aminopeptidase 2.
   
    0.700
SRSF3
Serine and arginine rich splicing factor 3.
   
  
 0.697
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
   0.688
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 
 0.684
NOP58
NOP58 ribonucleoprotein.
   
   0.648
ENSCPBP00000015486
annotation not available
   
 
 0.621
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.