STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC4H2Zinc finger C4H2-type containing. (224 aa)    
Predicted Functional Partners:
RNF220
Ring finger protein 220.
    
 
 0.591
MOGS
Mannosyl-oligosaccharide glucosidase.
      
 0.478
MFSD12
Major facilitator superfamily domain containing 12.
      
 0.457
TMEM132E
Transmembrane protein 132E.
      
 0.456
ENSCPBP00000019351
annotation not available
    
 
 0.424
ENSCPBP00000019352
annotation not available
    
 
 0.424
IGHMBP2
ATP-dependent RNA/DNA helicase IGHMBP2.
      
 0.420
RAB39B
RAB39B, member RAS oncogene family.
      
 0.402
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.