STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CERS6Sphingoid base N-palmitoyltransferase. (395 aa)    
Predicted Functional Partners:
KDSR
3-ketodihydrosphingosine reductase.
     
 0.937
DEGS1
Sphingolipid 4-desaturase/C4-monooxygenase.
   
 0.929
ENSCPBP00000008632
Sphingolipid delta(4)-desaturase/C4-hydroxylase DES2-like.
   
 0.927
SMPD2
Sphingomyelin phosphodiesterase 2.
     
 0.926
UGCG
UDP-glucose ceramide glucosyltransferase.
   
 
 0.925
ACER2
Alkaline ceramidase 2.
    
 0.924
SGPP1
Sphingosine-1-phosphate phosphatase 1.
    
 0.923
ASAH1
N-acylsphingosine amidohydrolase 1.
    
 0.922
PLPP2
Phospholipid phosphatase 2.
    
 0.922
ACER1
Alkaline ceramidase 1.
    
 0.921
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.