STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL5Oxysterol-binding protein-related protein 5. (903 aa)    
Predicted Functional Partners:
SLC22A18
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 18.
   
  
 0.651
PHLDA2
Pleckstrin homology like domain family A member 2.
      
 0.645
KATNAL2
Katanin p60 ATPase-containing subunit A1.
   
 
 0.573
TSSC4
Tumor suppressing subtransferable candidate 4.
      
 0.563
VAPA
Vesicle-associated membrane protein-associated protein A.
   
 
 0.481
GM2A
GM2 ganglioside activator.
      
 0.476
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
      
 0.455
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 
 0.419
NPC1
NPC intracellular cholesterol transporter 1.
   
 
 0.419
PI4KB
Phosphatidylinositol 4-kinase beta.
   
 
 0.405
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.