STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000009480Pulmonary surfactant-associated protein A-like. (230 aa)    
Predicted Functional Partners:
SFTPC
Surfactant protein C.
   
 
 0.711
SFTPB
Surfactant protein B.
   
 
 0.677
CKAP4
Cytoskeleton associated protein 4.
    
 0.489
ENSCPBP00000009523
Pulmonary surfactant-associated protein D-like.
  
0.461
ENSCPBP00000009491
annotation not available
  
0.453
ENSCPBP00000009574
annotation not available
  
0.445
MBL2
Mannose binding lectin 2.
   
0.434
ENSCPBP00000009533
annotation not available
   
0.434
ENSCPBP00000009542
Pulmonary surfactant-associated protein D-like.
   
0.434
ENSCPBP00000025801
Complement C1q and tumor necrosis factor-related protein 9-like.
  
     0.402
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.