STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000009519Caspase recruitment domain-containing protein 8-like. (441 aa)    
Predicted Functional Partners:
NLRP6
NACHT, LRR and PYD domains-containing protein 3.
 
  
 0.924
ENSCPBP00000015288
NACHT, LRR and PYD domains-containing protein 3-like.
 
  
 0.924
ENSCPBP00000018057
NACHT, LRR and PYD domains-containing protein 1-like.
  
 
 
0.915
ENSCPBP00000031918
NACHT, LRR and PYD domains-containing protein 3-like.
 
 
 0.914
ENSCPBP00000018042
NACHT, LRR and PYD domains-containing protein 1-like.
  
  
 
0.906
ENSCPBP00000005417
NACHT, LRR and PYD domains-containing protein 3-like.
 
 
 0.905
CASP9
Caspase 9.
    
 0.759
APAF1
Apoptotic peptidase activating factor 1.
    
 0.668
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 0.666
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 0.666
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.