STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000009727Cohesin complex subunit SA-1/2. (1199 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6).
   
 0.989
RAD21
RAD21 cohesin complex component.
   
 0.982
SMC1A
Structural maintenance of chromosomes 1A.
   
 0.981
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.981
RAD21L1
RAD21 cohesin complex component like 1.
   
 0.979
ESPL1
Extra spindle pole bodies like 1, separase.
   
 0.953
STAG2
Cohesin complex subunit SA-1/2.
  
  
 
0.932
ENSCPBP00000013464
Cohesin subunit SA-2-like.
  
  
 
0.931
STAG1
Cohesin complex subunit SA-1/2.
  
  
 
0.915
NIPBL
Cohesin loading factor subunit SCC2.
   
 0.866
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.