STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPP25LRibonucleases P/MRP protein subunit RPP25. (159 aa)    
Predicted Functional Partners:
RPP30
Ribonuclease P/MRP protein subunit RPP1.
    
 0.989
RPP21
Ribonuclease P protein subunit RPR2.
   
 0.988
POP5
POP5 homolog, ribonuclease P/MRP subunit.
   
 0.986
POP4
POP4 homolog, ribonuclease P/MRP subunit.
    
 0.985
POP1
POP1 homolog, ribonuclease P/MRP subunit.
    
 0.976
RPP38
Ribonucleases P/MRP protein subunit RPP38.
   
 0.969
RPP25
Ribonucleases P/MRP protein subunit RPP25.
  
  
 
0.903
RPP40
Ribonucleases P/MRP protein subunit RPP40.
    
  0.903
SNU13
SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5).
   
 0.698
NOB1
NIN1/PSMD8 binding protein 1 homolog.
     
 0.636
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.