STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRPF3Bromodomain and PHD finger-containing protein 3. (1137 aa)    
Predicted Functional Partners:
MEAF6
Chromatin modification-related protein EAF6.
    
 0.921
ING5
Inhibitor of growth family member 5.
    
 0.773
ING4
Inhibitor of growth family member 4.
    
 0.773
BRD1
Bromodomain-containing protein 1.
  
0.765
KAT6A
Histone acetyltransferase MYST3.
   
 0.747
KAT6B
Lysine acetyltransferase 6B.
   
 0.747
BRD9
Bromodomain containing 9.
   
 
0.714
KAT8
Histone acetyltransferase MYST1.
   
 0.696
KAT5
Histone acetyltransferase HTATIP.
   
 0.696
KAT7
Histone acetyltransferase MYST2.
   
 0.696
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.