STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR55WD repeat domain 55. (374 aa)    
Predicted Functional Partners:
WDR12
Ribosome biogenesis protein.
   
 
 0.835
IK
IK cytokine, down-regulator of HLA II.
 
      0.760
LCP2
Lymphocyte cytosolic protein 2.
      
 0.695
TTC27
Tetratricopeptide repeat domain 27.
   
    0.693
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
   0.637
GAK
Cyclin G associated kinase.
   
  
 0.585
ZMAT2
U4/U6.U5 tri-snRNP component SNU23.
      
 0.567
WDR46
WD repeat domain 46.
   
  
 0.557
THOC6
THO complex subunit 6.
      
 0.549
WDR18
WD repeat domain 18.
   
 
 0.548
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.