STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRIT1Leucine rich repeat, Ig-like and transmembrane domains 2. (756 aa)    
Predicted Functional Partners:
PTK7
Protein tyrosine kinase 7 (inactive).
    
 0.718
NTNG1
Netrin G1.
    
 0.714
ADGRL1
Adhesion G protein-coupled receptor L1.
    
   0.687
ADGRL3
Adhesion G protein-coupled receptor L3.
    
   0.687
ADGRL2
Adhesion G protein-coupled receptor L2.
    
   0.687
HOMEZ
Homeobox and leucine zipper encoding.
    
 0.665
MST1R
Macrophage stimulating 1 receptor.
   
 0.658
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 0.658
HGFAC
Hepatocyte growth factor activator.
    
 0.646
HABP2
Hyaluronan binding protein 2.
    
 0.646
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.