Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDHR1Cadherin related family member 1. (865 aa)    
Predicted Functional Partners:
JUP
Junction plakoglobin.
    
 0.755
CTNNB1
Catenin beta 1.
    
 0.755
ENSCPBP00000006818
Uncharacterized LOC101933606.
   
 0.720
CTNNA1
Catenin alpha 1.
   
 0.720
ENSCPBP00000015229
annotation not available
   
 0.720
CTNNA2
Catenin alpha 2.
   
 0.720
ENSCPBP00000025877
Catenin alpha-2.
   
 0.720
CDH12
Cadherin 12, type 2, N-cadherin 2.
    
 
0.709
CTNND1
Catenin (cadherin-associated protein), delta 1.
    
 0.691
TTC8
Tetratricopeptide repeat protein 8.
    
 
 0.686
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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