Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ZMAT5U11/U12 small nuclear ribonucleoprotein 20 kDa protein. (167 aa)    
Predicted Functional Partners:
RNPC3
U11/U12 small nuclear ribonucleoprotein 65 kDa protein.
   
 0.998
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
    
 0.993
SNRNP48
U11/U12 small nuclear ribonucleoprotein 48 kDa protein.
    
 0.984
SNRNP35
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
   
 0.981
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.976
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.975
SNRPE
Small nuclear ribonucleoprotein polypeptide E.
   
 0.972
PDCD7
Programmed cell death 7.
   
 0.969
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.964
ZRSR2
U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein.
   
 0.959
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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