STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT5U11/U12 small nuclear ribonucleoprotein 20 kDa protein. (167 aa)    
Predicted Functional Partners:
SNRPE
Small nuclear ribonucleoprotein polypeptide E.
   
 0.981
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.980
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.978
RNPC3
U11/U12 small nuclear ribonucleoprotein 65 kDa protein.
   
 0.976
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.974
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.970
SF3B1
Splicing factor 3B subunit 1.
   
 0.969
SF3B4
Splicing factor 3B subunit 4.
   
 0.956
SF3B2
Splicing factor 3b subunit 2.
   
 0.943
SF3B3
Splicing factor 3B subunit 3.
   
 0.939
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.