STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GHITMGrowth hormone inducible transmembrane protein. (379 aa)    
Predicted Functional Partners:
TMBIM6
Transmembrane BAX inhibitor motif containing 6.
   
  
0.677
UQCRC2
Cytochrome b-c1 complex subunit 2, mitochondrial.
   
 
 0.613
VAMP7
Vesicle associated membrane protein 7.
      
 0.581
CBARP
CACN beta subunit associated regulatory protein.
      
 0.578
CLRN3
Clarin 3.
      
 0.577
MRE11
MRE11 homolog, double strand break repair nuclease.
      
 0.577
LY96
Lymphocyte antigen 96.
      
 0.576
ITM2C
Integral membrane protein 2C.
      
 0.567
TSPAN18
Tetraspanin 18.
      
 0.553
COPS7A
COP9 signalosome complex subunit 7.
      
 0.551
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.