Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GHITMGrowth hormone inducible transmembrane protein. (379 aa)    
Predicted Functional Partners:
CLRN3
Clarin 3.
      
 0.692
CBARP
CACN beta subunit associated regulatory protein.
      
 0.692
MRE11
MRE11 homolog, double strand break repair nuclease.
      
 0.692
TMBIM6
Transmembrane BAX inhibitor motif containing 6.
   
  
 0.684
VAMP7
Vesicle associated membrane protein 7.
   
  
 0.655
LY96
Lymphocyte antigen 96.
      
 0.652
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
  
 0.626
GDAP1
Ganglioside induced differentiation associated protein 1.
      
 0.612
EIF2B3
Eukaryotic translation initiation factor 2B subunit gamma.
      
 0.600
UQCRC2
Cytochrome b-c1 complex subunit 2, mitochondrial.
   
    0.599
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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