STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CABP7Calcium binding protein 7. (215 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.714
WDR90
WD repeat domain 90.
   
 0.580
MYO9A
Myosin IXA.
    
 0.455
MYO9B
Unconventional myosin-IXb-like.
    
 0.455
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.444
DCLK1
Doublecortin-like kinase 1/2.
   
 0.436
FKBP3
FK506 binding protein 3.
   
 0.431
FKBP1B
FK506 binding protein 1B.
   
 0.431
ENSCPBP00000040210
annotation not available
   
 0.431
RCVRN
Recoverin.
    
 0.412
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.