Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CABP7Calcium binding protein 7. (215 aa)    
Predicted Functional Partners:
AK9
Adenylate kinase 9.
    
 0.755
NCS1
Neuronal calcium sensor 1.
    
 0.653
APEH
Acylaminoacyl-peptide hydrolase.
    
 
 0.551
NEURL1B
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.547
WDR90
WD repeat domain 90.
   
 0.537
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.529
PCP4L1
Purkinje cell protein 4 like 1.
    
 
 0.522
MYO3B
Myosin IIIB.
    
 0.487
ZMAT5
U11/U12 small nuclear ribonucleoprotein 20 kDa protein.
   
  
 0.487
MYO3A
Myosin IIIA.
    
 0.487
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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