Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABLIM3Actin binding LIM protein family member 3. (794 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42.
     
 0.927
ABLIM1
Actin binding LIM protein 1.
     
  0.921
ABLIM2
Actin binding LIM protein family member 2.
     
  0.921
DMTN
Dematin actin binding protein.
     
 0.840
RAC3
Ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3).
     
 0.756
RAC1
Rac family small GTPase 1.
     
 0.756
RAC2
Ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2).
     
 0.756
CYBC1
Chromosome unknown open reading frame, human C17orf62.
      
 0.625
SAMD8
Sphingomyelin synthase-related protein 1.
      
 0.571
GNG5
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5.
      
 0.569
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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