Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NKX6-1NK6 homeobox 1. (272 aa)    
Predicted Functional Partners:
NKX2-2
Homeobox protein Nkx-2.2.
   
  
 0.583
PTF1A
Pancreas specific transcription factor, 1a.
      
 0.577
BHLHE40
Basic helix-loop-helix family member e40.
      
 0.502
PDX1
Pancreatic and duodenal homeobox 1.
   
 0.483
NR5A1
Nuclear receptor subfamily 5 group A member 1.
      
 0.459
NR5A2
Nuclear receptor subfamily 5 group A member 2.
      
 0.459
BCL11A
B-cell lymphoma/leukemia 11A.
      
 0.450
SLC2A2
MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 2.
   
  
 0.440
ENSCPBP00000009541
annotation not available
      
 0.433
E2F6
E2F transcription factor 6.
      
 0.430
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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