Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C19orf71Chromosome unknown open reading frame, human C19orf71. (196 aa)    
Predicted Functional Partners:
EFHC2
EF-hand domain containing 2.
   
 
 0.892
EFCAB6
EF-hand calcium binding domain 6.
   
 
 0.891
CFAP161
Cilia and flagella associated protein 161.
    
 
 0.881
TEKT5
Tektin 5.
   
 
 0.815
EFHC1
EF-hand domain-containing protein 1.
   
 
 0.808
EFCAB1
EF-hand calcium binding domain 1.
    
 
 0.783
C9orf116
Chromosome unknown open reading frame, human C9orf116.
   
 
 0.774
TEKT2
Tektin 2.
   
 
 0.768
TEPP
Testis, prostate and placenta expressed.
   
   0.761
TEKT4
Tektin 4.
   
 
 0.750
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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