Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABRAXAS1Family with sequence similarity 175 member A. (593 aa)    
Predicted Functional Partners:
BABAM1
BRISC and BRCA1 A complex member 1.
    
  0.956
BRCA1
Breast cancer type 1 susceptibility protein homolog.
    
 0.951
AGTRAP
Angiotensin II receptor associated protein.
      
 0.578
BARD1
BRCA1 associated RING domain 1.
    
 0.489
ENSCPBP00000016034
annotation not available
    
 0.489
AK9
Adenylate kinase 9.
    
  0.448
ENSCPBP00000022027
annotation not available
    
  0.420
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
    
  0.418
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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