STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLRX1NLR family member X1. (991 aa)    
Predicted Functional Partners:
MAVS
Mitochondrial antiviral signaling protein.
     
 0.984
TUFM
Tu translation elongation factor, mitochondrial.
    
 
 0.733
TRAF6
TNF receptor associated factor 6.
   
 0.714
ATG16L1
Autophagy-related protein 16-1.
    
 
 0.608
UQCRC2
Cytochrome b-c1 complex subunit 2, mitochondrial.
    
 
 0.581
NLRC5
NLR family CARD domain containing 5.
      
0.579
ATG5
Autophagy-related protein 5.
      
 0.577
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.556
ATG12
Ubiquitin-like protein ATG12.
      
 0.551
STING1
Transmembrane protein 173.
   
 
 0.545
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.