STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN54Lin-54 DREAM MuvB core complex component. (803 aa)    
Predicted Functional Partners:
LIN9
Lin-9 DREAM MuvB core complex component.
   
 0.993
LIN52
Lin-52 DREAM MuvB core complex component.
    
 0.991
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.985
MYBL2
MYB proto-oncogene like 2.
    
 0.968
FOXM1
Forkhead box protein M.
    
 0.930
LIN37
Lin-37 DREAM MuvB core complex component.
    
 0.920
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.860
WDR73
WD repeat domain 73.
   
 0.804
RBL2
RB transcriptional corepressor like 2.
   
 0.803
RBL1
RB transcriptional corepressor like 1.
   
 0.803
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.