STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM149B1Family with sequence similarity 149 member B1. (635 aa)    
Predicted Functional Partners:
TBC1D32
TBC1 domain family member 32.
    
 
 0.636
GM2A
GM2 ganglioside activator.
    
 0.604
DNAJC9
DnaJ heat shock protein family (Hsp40) member C9.
      
 0.594
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.542
NEU1
Neuraminidase 1.
  
 
 0.527
AMDHD2
N-acetylglucosamine-6-phosphate deacetylase.
    
 0.492
HAL
Histidine ammonia-lyase.
   
    0.422
ENSCPBP00000002527
annotation not available
   
    0.422
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.