STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GIGYF1GRB10 interacting GYF protein 1. (840 aa)    
Predicted Functional Partners:
EIF4E2
Eukaryotic translation initiation factor 4E family member 2.
    
 
 0.954
DDX6
ATP-dependent RNA helicase DDX6/DHH1.
    
 
 0.944
TNRC6C
Trinucleotide repeat-containing gene 6 protein.
   
 
 0.902
TNRC6B
Trinucleotide repeat containing adaptor 6B.
   
 
 0.722
ZNF598
E3 ubiquitin-protein ligase ZNF598.
    
 
 0.691
ASCC3
Activating signal cointegrator 1 complex subunit 3.
   
 
 0.570
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.562
PATL2
DNA topoisomerase 2-associated protein PAT1.
    
 
 0.555
EDF1
Endothelial differentiation related factor 1.
      
 0.548
GAK
Cyclin G associated kinase.
   
  
 0.543
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.