STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCUCalcium uniporter protein, mitochondrial. (341 aa)    
Predicted Functional Partners:
MICU1
Calcium uptake protein 1, mitochondrial.
    
 0.950
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
    
 0.949
MICU2
Calcium uptake protein 2, mitochondrial.
    
 0.891
MICU3
Mitochondrial calcium uptake family member 3.
     
 0.782
PHB2
Prohibitin 2.
     
 0.690
SPG7
SPG7, paraplegin matrix AAA peptidase subunit.
     
 0.641
PHB
Prohibitin 1.
     
 0.623
ENSCPBP00000018899
AFG3 family protein.
     
 0.556
AFG3L2
AFG3 like matrix AAA peptidase subunit 2.
     
 0.556
VDAC2
Voltage-dependent anion channel protein 2.
      
 0.473
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.