STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFTRCystic fibrosis transmembrane conductance regulator. (1485 aa)    
Predicted Functional Partners:
SLC9A3R1
Sodium/hydrogen exchange regulatory cofactor NHE-RF1.
   
 0.976
TJP1
Tight junction protein 1.
     
 0.924
GOPC
Golgi associated PDZ and coiled-coil motif containing.
   
 0.874
VCP
Transitional endoplasmic reticulum ATPase.
   
 0.840
YWHAB
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta.
    
 
 0.829
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta.
    
 
 0.813
USP10
Ubiquitin carboxyl-terminal hydrolase 10.
    
 0.790
STUB1
STIP1 homology and U-box containing protein 1.
    
 
 0.788
SLC9A3R2
Sodium/hydrogen exchange regulatory cofactor NHE-RF2.
   
 0.774
ENSCPBP00000016029
annotation not available
   
 0.761
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.