STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIAH3Siah E3 ubiquitin protein ligase family member 3. (242 aa)    
Predicted Functional Partners:
CACYBP
Calcyclin binding protein.
    
 
 0.696
USP5
Ubiquitin carboxyl-terminal hydrolase 5/13.
    
  0.515
USP13
Ubiquitin specific peptidase 13 (isopeptidase T-3).
    
  0.515
ENSCPBP00000021501
annotation not available
    
   0.428
ENSCPBP00000021729
Ubiquitin-conjugating enzyme E2 variant 1.
    
   0.428
UBE2V2
Ubiquitin-conjugating enzyme E2 variant.
    
   0.428
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic.
   
 
 0.421
GAPDH
Glyceraldehyde 3-phosphate dehydrogenase.
   
 
 0.421
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.