STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN12Tetraspanin 12. (332 aa)    
Predicted Functional Partners:
NDP
NDP, norrin cystine knot growth factor.
    
 0.716
FZD4
Frizzled class receptor 4.
   
 
 0.710
RECK
Reversion inducing cysteine rich protein with kazal motifs.
      
 0.580
LRP5
Low density lipoprotein receptor-related protein 5/6.
      
 0.580
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
      
 0.577
ZNF408
Zinc finger protein 408.
      
 0.577
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
      
 0.457
ENSCPBP00000009502
annotation not available
      
 0.456
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.