STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP4Nucleolar GTP-binding protein. (634 aa)    
Predicted Functional Partners:
NSA2
NSA2, ribosome biogenesis homolog.
   
 
 0.999
RSL24D1
Large subunit ribosomal protein L24e.
   
 
 0.999
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 
 0.999
GNL2
Nuclear GTP-binding protein.
   
 
 0.999
MRTO4
MRT4 homolog, ribosome maturation factor.
   
 
 0.999
NOP53
Glioma tumor suppressor candidate region gene 2.
   
 
 0.998
DDX18
ATP-dependent RNA helicase DDX18/HAS1.
   
 
 0.998
RPF2
Ribosome production factor 2 homolog.
   
 
 0.997
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.997
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.997
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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