STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARS1Leucyl-tRNA synthetase. (1176 aa)    
Predicted Functional Partners:
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
 
 0.999
MARS1
methionyl-tRNA synthetase 1.
  
 0.999
IARS1
Isoleucyl-tRNA synthetase.
  
 0.997
YARS1
Tyrosyl-tRNA synthetase.
  
 0.992
QARS1
Glutaminyl-tRNA synthetase.
 
 0.982
RARS1
arginyl-tRNA synthetase 1.
  
 0.982
VARS1
Valyl-tRNA synthetase.
   
 0.964
AIMP1
Aminoacyl tRNA synthetase complex interacting multifunctional protein 1.
  
 0.954
KARS1
Lysyl-tRNA synthetase, class II.
  
 0.938
IARS2
Isoleucyl-tRNA synthetase 2, mitochondrial.
  
 0.936
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.