STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRIMPOLDNA-directed primase/polymerase protein. (339 aa)    
Predicted Functional Partners:
SMARCAL1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1.
    
 
 0.911
RPA1
Replication protein A1.
   
 
 0.877
TIMELESS
Timeless circadian regulator.
   
 
 0.869
CLSPN
Claspin.
   
 
 0.868
RPA3
Replication protein A3.
   
 
 0.853
RFWD3
Ring finger and WD repeat domain 3.
    
   0.846
ZRANB3
Zinc finger RANBP2-type containing 3.
    
 
 0.758
ENSCPBP00000003727
annotation not available
   
 
 0.731
TIPIN
TIMELESS interacting protein.
   
 
 0.731
B2M
Beta-2-microglobulin.
   
 
 0.546
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.