STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYCP2LSynaptonemal complex protein 2 like. (549 aa)    
Predicted Functional Partners:
SYCP3
Synaptonemal complex protein 3.
    
 0.614
RFC5
Replication factor C subunit 3/5.
      
 0.578
MTHFSD
Methenyltetrahydrofolate synthetase domain containing.
      
 0.567
SYCP1
Synaptonemal complex protein 1.
     
 0.539
GJD4
Gap junction protein delta 4.
      
 0.477
CRABP1
Cellular retinoic acid binding protein 1.
      
 0.450
CRABP2
Cellular retinoic acid binding protein 2.
      
 0.450
NDUFS5
NADH dehydrogenase (ubiquinone) Fe-S protein 5.
      
 0.442
SYCE2
Synaptonemal complex central element protein 2.
     
 0.420
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.