Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PPP4R3AProtein phosphatase 4 regulatory subunit 3A. (821 aa)    
Predicted Functional Partners:
PPP4C
Serine/threonine-protein phosphatase 4 catalytic subunit.
   
 0.998
PPP4R3B
Protein phosphatase 4 regulatory subunit 3B.
  
0.998
PPP4R2
Serine/threonine-protein phosphatase 4 regulatory subunit 2.
   
 0.995
PTPA
Protein phosphatase 2 phosphatase activator.
    
 
 0.919
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16.
   
 
 0.895
ENSCPBP00000006237
annotation not available
     
 0.854
ENSCPBP00000035425
annotation not available
     
 0.854
CHEK2
Serine/threonine-protein kinase CHEK2.
    
 
 0.726
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
   
   0.719
SF3B2
Splicing factor 3b subunit 2.
   
   0.666
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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