STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MKS1Meckel syndrome type 1 protein. (565 aa)    
Predicted Functional Partners:
B9D1
B9 domain-containing protein 1.
    
0.928
TCTN1
Tectonic family member 1.
    
 0.895
TMEM67
Transmembrane protein 67.
     
 0.887
AHI1
Abelson helper integration site 1.
    
 0.850
TMEM216
Transmembrane protein 216.
     
 0.845
TCTN3
Tectonic family member 3.
    
 0.825
TCTN2
Tectonic family member 2.
     
 0.821
ENSCPBP00000033691
Meckelin-like.
     
 0.812
TMEM80
Transmembrane protein 80.
     
 0.783
CC2D2A
Coiled-coil and C2 domain-containing protein 2A.
    
 0.760
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.