STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM104BFamily with sequence similarity 104 member A. (135 aa)    
Predicted Functional Partners:
VCP
Transitional endoplasmic reticulum ATPase.
    
   0.690
UBXN2B
UBX domain-containing protein 2B.
    
   0.633
CCDC127
Coiled-coil domain containing 127.
      
 0.625
MTO1
TRNA uridine 5-carboxymethylaminomethyl modification enzyme.
      
 0.578
CNOT10
CCR4-NOT transcription complex subunit 10.
      
 0.577
TADA2B
Transcriptional adapter 2-beta.
      
 0.576
ASB7
Ankyrin repeat and SOCS box containing 7.
      
 0.569
ENSCPBP00000016029
annotation not available
    
   0.564
AARS1
Alanyl-tRNA synthetase.
      
 0.541
ENSCPBP00000036573
annotation not available
      
 0.481
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.