STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLOD3Lysyl hydroxylase/galactosyltransferase/glucosyltransferase. (726 aa)    
Predicted Functional Partners:
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
  
0.965
COLGALT1
Collagen beta(1-O)galactosyltransferase 1.
   
0.947
COLGALT2
Collagen beta(1-O)galactosyltransferase 2.
   
0.947
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
  
  
 
0.901
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
  0.900
SMYD3
[histone H3]-lysine4/36 N-trimethyltransferase SMYD.
   
 0.678
ENSCPBP00000023777
[histone H3]-lysine4/36 N-trimethyltransferase SMYD.
   
 0.678
SUV39H1
[histone H3]-lysine9 N-trimethyltransferase SUV39H.
    
  0.674
SUV39H2
[histone H3]-lysine9 N-trimethyltransferase SUV39H.
    
  0.674
SETD7
SET domain containing lysine methyltransferase 7.
   
 0.673
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.