STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB3Ankyrin repeat and SOCS box containing 3. (540 aa)    
Predicted Functional Partners:
CHAC2
Glutathione-specific gamma-glutamylcyclotransferase.
      
 0.829
GPR75
G protein-coupled receptor 75.
      
 0.823
PSME4
Proteasome activator subunit 4.
   
 
 0.761
AGPAT4
Lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase.
   
 
 0.719
MAP3K4
Mitogen-activated protein kinase kinase kinase 4.
    
 
 0.656
TLR3
Toll like receptor 3.
   
 0.645
ERLEC1
Endoplasmic reticulum lectin 1.
      
 0.604
RPUSD2
RNA pseudouridylate synthase domain containing 2.
    
 
 0.582
VPS9D1
VPS9 domain containing 1.
      
 0.577
PNO1
RNA-binding protein PNO1.
   
 
 0.571
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.