STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDFY4WDFY family member 4. (3193 aa)    
Predicted Functional Partners:
ATG5
Autophagy-related protein 5.
    
 
 0.718
MYCBP2
MYC binding protein 2, E3 ubiquitin protein ligase.
   
  
 0.710
WDFY2
WD repeat and FYVE domain-containing protein 2.
   
  
 0.703
TBC1D16
TBC1 domain family member 16.
      
 0.703
WDFY1
WD repeat and FYVE domain-containing protein 1.
   
  
 0.703
LAPTM5
Lysosomal-associated transmembrane protein.
   
  
 0.669
RACK1
Guanine nucleotide-binding protein subunit beta-2-like 1 protein.
    
 0.647
VTA1
Vacuolar protein sorting-associated protein VTA1.
    
 
 0.619
BECN1
Beclin 1.
    
 
 0.608
ENSCPBP00000035106
annotation not available
   
 
 0.598
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.