STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC34Leucine rich repeat containing 34. (491 aa)    
Predicted Functional Partners:
MYNN
Myoneurin.
     
 0.644
RSPH14
Radial spoke head 14 homolog.
    
 
 0.628
INSYN2B
Family with sequence similarity 196 member B.
    
 
 0.611
CFAP161
Cilia and flagella associated protein 161.
   
  
 0.603
DLEC1
DLEC1 cilia and flagella associated protein.
    
 0.602
LRRC23
Leucine rich repeat containing 23.
   
  
 0.587
CCDC146
Coiled-coil domain containing 146.
      
 0.576
LYPD6
LY6/PLAUR domain containing 6.
   
  
 0.576
SAXO2
Stabilizer of axonemal microtubules 2.
      
 0.569
DNPEP
Aspartyl aminopeptidase.
      
 0.558
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.