STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTRF1LMitochondrial translational release factor 1 like. (399 aa)    
Predicted Functional Partners:
N6AMT1
N-6 adenine-specific DNA methyltransferase 1 (putative).
  
 
 0.856
MRPL20
Large subunit ribosomal protein L20.
 
 
 0.851
HEMK1
HemK methyltransferase family member 1.
  
 
 0.842
YARS1
Tyrosyl-tRNA synthetase.
  
  
 0.842
MRPL27
Large subunit ribosomal protein L27.
  
 
 0.830
MRPL9
Large subunit ribosomal protein L9.
   
 
 0.819
MRPL17
Large subunit ribosomal protein L17.
  
 
 0.817
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
  
 0.813
MRPL32
Large subunit ribosomal protein L32.
  
 
 0.805
MRPS16
Mitochondrial ribosomal protein S16.
  
 
 0.801
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.