STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALADAminolevulinate dehydratase. (332 aa)    
Predicted Functional Partners:
HMBS
Hydroxymethylbilane synthase.
 
 0.999
UROS
Uroporphyrinogen III synthase.
  
 0.991
ALAS2
5-aminolevulinate synthase, erythroid-specific, mitochondrial-like.
    
 0.967
ALAS1
5'-aminolevulinate synthase 1.
    
 0.967
OAT
Ornithine--oxo-acid transaminase.
  
 
 0.920
AASDH
Aminoadipate-semialdehyde dehydrogenase.
     
 0.841
FASN
Fatty acid synthase, animal type.
     
 0.840
UROD
Uroporphyrinogen decarboxylase.
 
 
 0.826
PPOX
Protoporphyrinogen/coproporphyrinogen III oxidase.
  
  
 0.781
CPOX
Coproporphyrinogen III oxidase.
  
  
 0.765
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.