STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSRP1Nuclear speckle splicing regulatory protein 1. (570 aa)    
Predicted Functional Partners:
CDC5L
Pre-mRNA-splicing factor CDC5/CEF1.
   
   0.948
SRRM1
Serine/arginine repetitive matrix protein 1.
     
 0.786
PPIL4
Peptidyl-prolyl cis-trans isomerase-like 4.
   
 0.731
NCMAP
Non-compact myelin associated protein.
     
 0.718
SLU7
Pre-mRNA-processing factor SLU7.
   
 
 0.717
CWC22
CWC22 spliceosome associated protein homolog.
   
 
  0.692
PPIG
Peptidyl-prolyl isomerase G (cyclophilin G).
   
  0.689
PPIL2
Peptidyl-prolyl cis-trans isomerase-like 2.
   
  0.686
PPIL1
Peptidyl-prolyl cis-trans isomerase-like 1.
   
  0.686
YJU2
Coiled-coil domain containing 94.
   
 
  0.683
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.