STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000028532annotation not available (177 aa)    
Predicted Functional Partners:
MSH2
DNA mismatch repair protein MSH2.
 
 
 0.986
PCNA
Proliferating cell nuclear antigen.
   
 0.978
MLH1
DNA mismatch repair protein MLH1.
  
 0.969
PMS2
PMS1 homolog 2, mismatch repair system component.
  
 0.965
PMS1
PMS1 homolog 1, mismatch repair system component.
  
 0.937
EXO1
Exonuclease 1.
   
 0.933
MSH3
DNA mismatch repair protein MSH3.
 
  
 
 0.916
RPA1
Replication protein A1.
   
 0.884
MSH6
DNA mismatch repair protein MSH6.
 
      0.882
MLH3
DNA mismatch repair protein MLH3.
  
 0.881
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.