STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL23ALarge subunit ribosomal protein L23Ae. (155 aa)    
Predicted Functional Partners:
FAU
FAU, ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
RPL35
Large subunit ribosomal protein L35e.
 
 0.979
RPL19
Large subunit ribosomal protein L19e.
  
 0.977
RPLP0
Ribosomal protein lateral stalk subunit P0.
  
 0.974
RPL14
Large subunit ribosomal protein L14e.
  
 0.974
RPL13
Large subunit ribosomal protein L13e.
   
 0.973
RPL39
Large subunit ribosomal protein L39e.
   
 0.973
RPL24
Large subunit ribosomal protein L24e.
   
 0.972
RPL26
Large subunit ribosomal protein L26e.
  
 0.972
RPL4
Large subunit ribosomal protein L4e.
  
 0.972
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.