Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRCA1 | LONRF3 | ENSCPBP00000022768 | ENSCPBP00000029425 | Breast cancer type 1 susceptibility protein homolog. | LON peptidase N-terminal domain and ring finger 3. | 0.511 |
BRCA1 | PAXIP1 | ENSCPBP00000022768 | ENSCPBP00000025667 | Breast cancer type 1 susceptibility protein homolog. | PAX interacting protein 1. | 0.896 |
BRCA1 | PRKDC | ENSCPBP00000022768 | ENSCPBP00000029700 | Breast cancer type 1 susceptibility protein homolog. | Protein kinase, DNA-activated, catalytic polypeptide. | 0.622 |
BRCA1 | RNF8 | ENSCPBP00000022768 | ENSCPBP00000036472 | Breast cancer type 1 susceptibility protein homolog. | E3 ubiquitin-protein ligase RNF8. | 0.774 |
BRCA1 | RPS27A | ENSCPBP00000022768 | ENSCPBP00000029668 | Breast cancer type 1 susceptibility protein homolog. | Ubiquitin-small subunit ribosomal protein S27Ae. | 0.666 |
BRCA1 | TP53BP1 | ENSCPBP00000022768 | ENSCPBP00000034616 | Breast cancer type 1 susceptibility protein homolog. | Tumor suppressor p53-binding protein 1. | 0.939 |
BRCA1 | UBA52 | ENSCPBP00000022768 | ENSCPBP00000017639 | Breast cancer type 1 susceptibility protein homolog. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.637 |
BRCA1 | UBE2N | ENSCPBP00000022768 | ENSCPBP00000001927 | Breast cancer type 1 susceptibility protein homolog. | Ubiquitin conjugating enzyme E2 N. | 0.790 |
BRCA1 | UBE2V2 | ENSCPBP00000022768 | ENSCPBP00000028756 | Breast cancer type 1 susceptibility protein homolog. | Ubiquitin-conjugating enzyme E2 variant. | 0.530 |
LONRF3 | BRCA1 | ENSCPBP00000029425 | ENSCPBP00000022768 | LON peptidase N-terminal domain and ring finger 3. | Breast cancer type 1 susceptibility protein homolog. | 0.511 |
LONRF3 | PAXIP1 | ENSCPBP00000029425 | ENSCPBP00000025667 | LON peptidase N-terminal domain and ring finger 3. | PAX interacting protein 1. | 0.545 |
LONRF3 | PRKDC | ENSCPBP00000029425 | ENSCPBP00000029700 | LON peptidase N-terminal domain and ring finger 3. | Protein kinase, DNA-activated, catalytic polypeptide. | 0.471 |
LONRF3 | RNF8 | ENSCPBP00000029425 | ENSCPBP00000036472 | LON peptidase N-terminal domain and ring finger 3. | E3 ubiquitin-protein ligase RNF8. | 0.537 |
LONRF3 | RPS27A | ENSCPBP00000029425 | ENSCPBP00000029668 | LON peptidase N-terminal domain and ring finger 3. | Ubiquitin-small subunit ribosomal protein S27Ae. | 0.612 |
LONRF3 | TP53BP1 | ENSCPBP00000029425 | ENSCPBP00000034616 | LON peptidase N-terminal domain and ring finger 3. | Tumor suppressor p53-binding protein 1. | 0.564 |
LONRF3 | TRIP12 | ENSCPBP00000029425 | ENSCPBP00000034028 | LON peptidase N-terminal domain and ring finger 3. | Thyroid hormone receptor interactor 12. | 0.553 |
LONRF3 | UBA52 | ENSCPBP00000029425 | ENSCPBP00000017639 | LON peptidase N-terminal domain and ring finger 3. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.572 |
LONRF3 | UBE2N | ENSCPBP00000029425 | ENSCPBP00000001927 | LON peptidase N-terminal domain and ring finger 3. | Ubiquitin conjugating enzyme E2 N. | 0.551 |
LONRF3 | UBE2V2 | ENSCPBP00000029425 | ENSCPBP00000028756 | LON peptidase N-terminal domain and ring finger 3. | Ubiquitin-conjugating enzyme E2 variant. | 0.526 |
PAXIP1 | BRCA1 | ENSCPBP00000025667 | ENSCPBP00000022768 | PAX interacting protein 1. | Breast cancer type 1 susceptibility protein homolog. | 0.896 |
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