STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PASD1Neuronal PAS domain-containing protein 2. (837 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
   
0.836
ARNTL2
Aryl hydrocarbon receptor nuclear translocator-like protein 2.
   
0.836
PER1
Period circadian regulator 1.
    
0.727
PER2
Period circadian protein 2.
    
0.727
ENSCPBP00000004405
Neuronal PAS domain-containing protein 4-like.
    
 0.660
NPAS4
Neuronal PAS domain protein 4.
    
0.660
CRY2
Cryptochrome circadian clock 2.
   
 0.598
ENSCPBP00000026028
Deoxyribodipyrimidine photo-lyase.
   
 0.598
CRY1
Cryptochrome circadian clock 1.
   
 0.598
AHRR
Aryl hydrocarbon receptor repressor.
   
0.589
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.