STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000032543Collagen alpha-6(VI) chain-like. (1202 aa)    
Predicted Functional Partners:
CD44
CD44 molecule (Indian blood group).
    
 0.905
ITGA3
Integrin subunit alpha 3.
   
 0.705
ITGB3
Integrin subunit beta 3.
    
 0.703
ITGB5
Integrin subunit beta 5.
    
 0.703
ITGB1
Integrin subunit beta 1.
   
 0.696
ITGB7
Integrin subunit beta 7.
   
 0.696
ITGB6
Integrin subunit beta 6.
    
 0.695
ITGB4
Integrin subunit beta 4.
    
 0.695
ITGA6
Integrin subunit alpha 6.
    
 0.694
ITGA7
Integrin subunit alpha 7.
    
 0.694
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.