STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000033307annotation not available (264 aa)    
Predicted Functional Partners:
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
 
     0.939
DDX10
ATP-dependent RNA helicase DDX10/DBP4.
   
 
 0.932
ENSCPBP00000033309
annotation not available
 
     0.922
UTP3
UTP3, small subunit processome component homolog (S. cerevisiae).
   
 
 0.914
UTP6
U3 small nucleolar RNA-associated protein 6.
   
 
 0.885
UTP18
U3 small nucleolar RNA-associated protein 18.
   
 
 0.881
NOL6
U3 small nucleolar RNA-associated protein 22.
   
 
 0.869
NAT10
N-acetyltransferase 10.
   
 
 0.853
ABT1
Activator of basal transcription 1.
   
 
 0.834
NOM1
Nucleolar MIF4G domain-containing protein 1.
   
   0.803
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.