STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIPSNAP3ANipsnap homolog 3A. (216 aa)    
Predicted Functional Partners:
MTHFSD
Methenyltetrahydrofolate synthetase domain containing.
   
    0.617
UTP15
U3 small nucleolar RNA-associated protein 15.
   
    0.499
WDR6
WD repeat domain 6.
   
    0.497
PSMD1
26S proteasome regulatory subunit N2.
   
    0.497
ENSCPBP00000005073
annotation not available
   
  0.489
DBT
2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase).
   
 
  0.486
NOP56
NOP56 ribonucleoprotein.
   
    0.485
RPP38
Ribonucleases P/MRP protein subunit RPP38.
   
    0.422
SMC1A
Structural maintenance of chromosomes 1A.
   
    0.422
SNU13
SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5).
   
    0.422
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.