Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCPBP00000027118 | NDST4 | ENSCPBP00000027118 | ENSCPBP00000035591 | Glypican-5-like. | Heparan sulfate N-deacetylase/N-sulfotransferase NDST4. | 0.401 |
ENSCPBP00000027118 | SDC1 | ENSCPBP00000027118 | ENSCPBP00000028233 | Glypican-5-like. | Syndecan 1. | 0.488 |
ENSCPBP00000027118 | SDC2 | ENSCPBP00000027118 | ENSCPBP00000008014 | Glypican-5-like. | Syndecan 2. | 0.451 |
ENSCPBP00000027118 | SDC4 | ENSCPBP00000027118 | ENSCPBP00000025074 | Glypican-5-like. | Syndecan 4. | 0.403 |
GLCE | NDST4 | ENSCPBP00000036776 | ENSCPBP00000035591 | Heparosan-N-sulfate-glucuronate 5-epimerase. | Heparan sulfate N-deacetylase/N-sulfotransferase NDST4. | 0.403 |
GLCE | SDC1 | ENSCPBP00000036776 | ENSCPBP00000028233 | Heparosan-N-sulfate-glucuronate 5-epimerase. | Syndecan 1. | 0.421 |
GLCE | SDC2 | ENSCPBP00000036776 | ENSCPBP00000008014 | Heparosan-N-sulfate-glucuronate 5-epimerase. | Syndecan 2. | 0.612 |
GLCE | SDC4 | ENSCPBP00000036776 | ENSCPBP00000025074 | Heparosan-N-sulfate-glucuronate 5-epimerase. | Syndecan 4. | 0.406 |
GPC3 | NDST4 | ENSCPBP00000037538 | ENSCPBP00000035591 | Glypican 3. | Heparan sulfate N-deacetylase/N-sulfotransferase NDST4. | 0.401 |
GPC3 | SDC1 | ENSCPBP00000037538 | ENSCPBP00000028233 | Glypican 3. | Syndecan 1. | 0.488 |
GPC3 | SDC2 | ENSCPBP00000037538 | ENSCPBP00000008014 | Glypican 3. | Syndecan 2. | 0.451 |
GPC3 | SDC4 | ENSCPBP00000037538 | ENSCPBP00000025074 | Glypican 3. | Syndecan 4. | 0.403 |
GPC5 | NDST4 | ENSCPBP00000031817 | ENSCPBP00000035591 | Glypican 5. | Heparan sulfate N-deacetylase/N-sulfotransferase NDST4. | 0.401 |
GPC5 | SDC1 | ENSCPBP00000031817 | ENSCPBP00000028233 | Glypican 5. | Syndecan 1. | 0.488 |
GPC5 | SDC2 | ENSCPBP00000031817 | ENSCPBP00000008014 | Glypican 5. | Syndecan 2. | 0.451 |
GPC5 | SDC4 | ENSCPBP00000031817 | ENSCPBP00000025074 | Glypican 5. | Syndecan 4. | 0.403 |
NDST4 | ENSCPBP00000027118 | ENSCPBP00000035591 | ENSCPBP00000027118 | Heparan sulfate N-deacetylase/N-sulfotransferase NDST4. | Glypican-5-like. | 0.401 |
NDST4 | GLCE | ENSCPBP00000035591 | ENSCPBP00000036776 | Heparan sulfate N-deacetylase/N-sulfotransferase NDST4. | Heparosan-N-sulfate-glucuronate 5-epimerase. | 0.403 |
NDST4 | GPC3 | ENSCPBP00000035591 | ENSCPBP00000037538 | Heparan sulfate N-deacetylase/N-sulfotransferase NDST4. | Glypican 3. | 0.401 |
NDST4 | GPC5 | ENSCPBP00000035591 | ENSCPBP00000031817 | Heparan sulfate N-deacetylase/N-sulfotransferase NDST4. | Glypican 5. | 0.401 |
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