STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPG5Ectopic P-granules autophagy protein 5 homolog. (2586 aa)    
Predicted Functional Partners:
TECPR2
Tectonin beta-propeller repeat-containing protein 2.
   
  
 0.745
ATG5
Autophagy-related protein 5.
      
 0.645
SNAP29
Synaptosomal-associated protein 29.
      
 0.628
EI24
EI24 autophagy associated transmembrane protein.
      
 0.598
ATG7
Ubiquitin-like modifier-activating enzyme ATG7.
      
 0.594
ATG2B
Autophagy-related protein 2.
   
  
 0.582
VMP1
Vacuole membrane protein 1.
      
 0.580
ATG3
Ubiquitin-like-conjugating enzyme ATG3.
      
 0.579
STX17
Syntaxin 17.
      
 0.578
ATG14
Autophagy related 14.
      
 0.578
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.